Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSERGLLIVLSGPSGVGKGTVRKAIFESED-NDFQYSISMTTRKMREGEVEGVDYFFRSKEEFESMIEAGEMLEYAEYVGNYYGTPLSYVNKTLDEGKDVFLEIEVQGAKQVKEKVPDGVFIFLTPPDLAELKSRIVGRGTDADEVIEERMKVAKEEIEMMALYDYAVVNDEVPLAVERIKNIIASEHFRVDRVIGKYIKMLKEM
2F3T Chain:E ((3-204))---QGTLYIVSAPSGAGKSSLIQALLKTQPLYDTQVSVSHTTRQPRPGEVHGEHYFFVNHDEFKEMISRDAFLEHAEVFGNYYGTSREAIEQVLATGVDVFLDIDWQGAQQIRQKMPHARSIFILPPSKIELDRRLRGRGQDSEEVIAKRMAQAVAEMSHYAEYDYLIVNDDFDTALTDLKTIIRAERLRMSRQKQRHDALISKL


General information:
TITO was launched using:
RESULT:

Template: 2F3T.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain E - contact count / total energy / energy per contact / energy per residue : 831 -21960 -26.43 -109.25
target 2D structure prediction score : 0.69
Monomeric hydrophicity matching model chain E : 0.80

3D Compatibility (PKB) : -26.43
2D Compatibility (Sec. Struct. Predict.) : 0.69
1D Compatibility (Hydrophobicity) : 0.80
QMean score : 0.488

(partial model without unconserved sides chains):
PDB file : Tito_2F3T.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2F3T-query.scw
PDB file : Tito_Scwrl_2F3T.pdb: