Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequencePATPAPSKPAAVLPQL----CKVEMFDNNARFVGMARGNWDKDFVIKGHTIKCNTRCETKDVVLPKNWSVKGYMIKV-----
1D3B Chain:A ((4-75))------GVPIKVLHEAEGHIVTCET-NTGEVYRGKLI-EAEDNMNCQMSNITVTYR--DGRVAQLEQVYIRGCKIRFLILPD


General information:
TITO was launched using:
RESULT:

Template: 1D3B.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 229 18413 80.41 292.27
target 2D structure prediction score : 0.52
Monomeric hydrophicity matching model chain A : 0.62

3D Compatibility (PKB) : 80.41
2D Compatibility (Sec. Struct. Predict.) : 0.52
1D Compatibility (Hydrophobicity) : 0.62
QMean score : 0.703

(partial model without unconserved sides chains):
PDB file : Tito_1D3B.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1D3B-query.scw
PDB file : Tito_Scwrl_1D3B.pdb: