Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMWSYKMLKRLWMIFGPVLIAGLLVFLLIFFYPTEMHHNLGAEKRSAVATTIDSFKERSQKVRALSDPNVRFVPFFGSSEWLRFDGAHPAVLAEKYNRSYRPYLLGQGGAASLNQYFGMQQMLPQLENKQVVYVISPQWFSKNGYDPAAFQQYFNGDQLTSFLKHQSGDQASQYAATRLLQQFPNVAMKDLVQKLASKEELSTADNEMIELLARFNECQASFFGQFSVRGYVNYDKHVAKYLKILPDQFSYQAIEDVVKADAEKNTSNNEMGMENYFYNEQIKKDLKKLKDSQKSFTYLKSPEYNDLQLVLTQFSKSKVNPIFIIPPVNK-KWMDYAGLREDMYQQTVQKIRYQLESQGFTNIADFSKDG-------GEPFFMKDTIHLGWLGWLAFDKAVDPFLSNPTPAPTYHLNERFFSKDWATYDGDVKEFQ
4JJ4 Chain:B ((115-214))---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATLRSLVLETKPLVKGIILMTPFYIEGNEQDPM---RRTMDQYGRVVKQIAEETNSL-FVDTQAAFNEVLKTLYPAALAWARVHPSVAGHMILARAFLREIGFE----------------------------


General information:
TITO was launched using:
RESULT:

Template: 4JJ4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 316 -14582 -46.14 -158.49
target 2D structure prediction score : 0.77
Monomeric hydrophicity matching model chain B : 0.53

3D Compatibility (PKB) : -46.14
2D Compatibility (Sec. Struct. Predict.) : 0.77
1D Compatibility (Hydrophobicity) : 0.53
QMean score : 0.334

(partial model without unconserved sides chains):
PDB file : Tito_4JJ4.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4JJ4-query.scw
PDB file : Tito_Scwrl_4JJ4.pdb: