Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTSLNSSYGRSQAVPLSVFEQSKDAHIIRSDEEAIEIAKQLAQEFATEASDRDRERRLPLNEIQQFSQSGLWAITVPKQFGGAQVKYRTLAEVIKTIASVDSSLAQLPQNHLAFIEHLRLDAKPEQQQFFFNLVLRGIRF-GNAFSEKHSKTVADLTTTLRKTEHG-YEINGKKFFATGALLAHWIPIVAVNELGQP-----YAALVPRETSGVNIINDWSGFGQRTTASGTVELNQVPVREEYLVPIYQAF-------ESPTPAGAISQFIQAAVDAGIARGAIEETIQYVKNHSRAWIDSGLEKASDDPYTIANIGDLKIKLRAA-----------EAVLDLAGDAIDQAIANTTEEHVNQATLLVAEAKVLTTEIAILAANKLFELSGTRSTLSELNLDRHWRNARTHTLHDPVRWKYHIVGNYYLNGVQPPRHAWS
3X0Y Chain:E ((17-411))------------------------------DNDPVAVARGLAEKWRATAVERDRAGGSATAEREDLRASGLLSLLVPREYGGWGADWPTAIEVVREIAAADGSLGHLFGYHLTNAPMIELIGSQEQEEHLYTQIAQNNWWTGNASSENNSH-VLDWKVRATPTEDGGYVLNGTKHFCSGAKGSDLLFVFGVVQDDSPQQGAIIAAAIPTSRAGVTPNDDWAAIGMRQTDSGSTDFHNVKVEPDEVLGAPNAFVLAFIQSERGSLFAPIAQLIFANVYLGIAHGALDAAREYTRTQARPWTPAGIQQATEDPYTIRSYGEFTIALQGADAAAREAAHLLQTVWD-KGDAL-------TPEDRGELMVKVSGVKALATNAALNISSGVFEVIGARGTHPRYGFDRFWRNVRTHSLHDPVSYKIADVGKHTLNGQYP------


General information:
TITO was launched using:
RESULT:

Template: 3X0Y.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain E - contact count / total energy / energy per contact / energy per residue : 1999 -13067 -6.54 -35.31
target 2D structure prediction score : 0.52
Monomeric hydrophicity matching model chain E : 0.76

3D Compatibility (PKB) : -6.54
2D Compatibility (Sec. Struct. Predict.) : 0.52
1D Compatibility (Hydrophobicity) : 0.76
QMean score : 0.401

(partial model without unconserved sides chains):
PDB file : Tito_3X0Y.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3X0Y-query.scw
PDB file : Tito_Scwrl_3X0Y.pdb: