Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMLLEKILQSQGFGSRKYCQQLIKNGSVSIDGEVVSDLKKQFSPENFEFSVFGQNYQYREKIYIALRKPQGFECSHHPQHHQSVFSLLPETM-IHRGVQAVGRLDQDTTGLLLLTDDGKYLQVLTHPR--KHVPKVYHVTTYDPVTPE--QIEMLI------QGVNLHQEKEVFAAT--DVALL----GTHQLTMTIHQGVYHQVKRMIAAVGNKVEKLHRHQIGQLVLPEIEDGDWVYLSEQEKQLAQNII
1V9K Chain:B ((3-174))-----------------------------------------------------VIMYEDDHILVLNKPSGTAVHGGSGLSFGVIEGLRALRPEARFLELVHRLDRDTSGVLLVAKKRSALRSLHEQLREKGMQKDYLALVRGQWQSHVKSVQAPLLKNILQSGERIVRVSQEGKPSETRFKVEERYAFATLVRCSPVTGRTHQIRVHTQYAGHPIAFDDRYGDRE--------------------------


General information:
TITO was launched using:
RESULT:

Template: 1V9K.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 629 -11898 -18.92 -76.76
target 2D structure prediction score : 0.45
Monomeric hydrophicity matching model chain B : 0.61

3D Compatibility (PKB) : -18.92
2D Compatibility (Sec. Struct. Predict.) : 0.45
1D Compatibility (Hydrophobicity) : 0.61
QMean score : 0.228

(partial model without unconserved sides chains):
PDB file : Tito_1V9K.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1V9K-query.scw
PDB file : Tito_Scwrl_1V9K.pdb: