Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMINCGAKMLIQRGGLKVVAGLGISGV-SAVNFLHEQGYQVAVTDSRPTPPGHDQIPA-GVKTSFGQLDQELLLQAEEIILSPGLAPQLPEIQAAIAKGISVVGDIQLLRRAT-DVPIVAITGSNAKSTVTTLIGLMAKDAGKKV-AVGGNLGRPALDL-LKDQPELLVLELSSFQLETTSHLNAEVAVVLNMSEDHLDRHGNMLGYHQAKHRIFQGA---KKVVFNRDDALSRPLVPD-TTPMQSFGLNAPDLNQYGVLR-D--ADGTLWLARGLQRLIKSSDLYIQGMHNVANALACLALGEAIGLPMESMLETLKQFKGLEHRCEYVKT---------VHDVRYYNDSKGTNVGATLAAIDGLGAAIEVKKGKVALILGGQG--KGQ-DFSPLRSSIEKYAKVVVLI-----GE------DAPVIEQAIQGA--TKILHAATLKEAVELCQRETQAEDVVLLSPACASFDMFKSYNDRGQQFVACVNSLV
4HV4 Chain:B ((18-471))--------EMRRVRHIHFVGIGGAGMGGIAEVLANEGYQISGSDLAPNSV-TQHLTALGAQIYFH-HRPENVLDASVVVVSTAISADNPEIVAAREARIPVIRRAEMLAELMRYRHGIAVAGTHGKTTTTAMLSSIYAEAGLDPTFVNGGLVKAAGTHARLGSSRYLIAEADESDAS-FLHLQPMVAIVTNIEAD------DFENLKQTFINFLHNLPFYGRAVMCIDDPVVRELLPRVGRHITTYGFSDD--ADVQIASYRQEGPQGHFTLRRQDKPLIEVTLNAPGRHNALNAAAAVAVATEEGIEDEDILRALVGFQGTGRRFDFLGNFPLAPVNGKEGSAMLVDDY-GHHPTEVDATIKAARAGW--PDKRIVMLFQPHRYTRTRDLYDDFANVLSQ-VDVLLMLDVYAAGEPPIPGADSRALCRTIRNRGKLDPILVPDSESAPEMLAQILNGEDLILVQGAGNI----------------------


General information:
TITO was launched using:
RESULT:

Template: 4HV4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 2293 -5185 -2.26 -12.65
target 2D structure prediction score : 0.59
Monomeric hydrophicity matching model chain B : 0.71

3D Compatibility (PKB) : -2.26
2D Compatibility (Sec. Struct. Predict.) : 0.59
1D Compatibility (Hydrophobicity) : 0.71
QMean score : 0.512

(partial model without unconserved sides chains):
PDB file : Tito_4HV4.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4HV4-query.scw
PDB file : Tito_Scwrl_4HV4.pdb: