Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMCCFVVYGGVLNMSDKKTSLVIC-FTPLQMLIAEKIVAQQPSVDLIVIALNNNDKYKYYYNIFQHPNIAKQYYLFDNNKSRFFKFINIIKFNEN--FKLEKFYENIYISSIDNK----YTHNILSKVNFNNLYTYDDGTANIVKNSIY---FKQTFESKLKDIVLKLIGIRFNLNKIKKLSRKHYTIYKGIQNIVEQTEYVSIIEKKEEDRNIFIDQEIKIFLGQPLKDIDKNFDTLALKKLL---VMEEVNYHFKHPRETDEAFF---EEIKTSYIFEDFFAKELSKYRKVIIYT-LSSTAALNIISLDNVEIRLIKNNTVEIKYPDLVQLFIKSGATVIDMDSIK
4NTC Chain:A ((2-326))----MSIGKLLSNGALLVDVLIIGAGPAGLSTATGLARQLHTAVVFDSGVYRNAKTQHMHNVLGWDH-RNPAELRAAGRADLTTRYSTIQFQNSTIEAIRQVETNQLFEARDNEGHSWYGRKVVLATGVRDIPLDIEGYSECWANGIYHCLFCDGYEERGQETVGVLA-----LGPIANPARALHLARMALRL----SESVTIYTNGNEQLAKEIQQAAEE---SPVGASGLKFEARPIRRFEKGDVAKTVIVHLGESESKTEGFLVYNPQTEVNGPFAKQLALNMTEGGDILTTPPFYETSVPGVFAVGDCATPLKA----VTPAVSMGSLAAGGLVAQLQAQAL-


General information:
TITO was launched using:
RESULT:

Template: 4NTC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1727 -16944 -9.81 -55.01
target 2D structure prediction score : 0.30
Monomeric hydrophicity matching model chain A : 0.67

3D Compatibility (PKB) : -9.81
2D Compatibility (Sec. Struct. Predict.) : 0.30
1D Compatibility (Hydrophobicity) : 0.67
QMean score : 0.162

(partial model without unconserved sides chains):
PDB file : Tito_4NTC.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4NTC-query.scw
PDB file : Tito_Scwrl_4NTC.pdb: