Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNKLMVAVFAGMVPLASFSAQAAT----PEQECQKLQDDYNLIYASKGFCFKDQDAKEKYGNENCHTTKPKFSDKEQQRLDAIKERQKELKCK
3N9U Chain:I ((58-149))---VYVGSFSWWTTDQQLIQVIRSIGVYDVVELKFAENRANGQSKGYAEVVVVHKLLELLPGKVLNGEKVDVRPATRQNLSQFEAQARKR---


General information:
TITO was launched using:
RESULT:

Template: 3N9U.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain I - contact count / total energy / energy per contact / energy per residue : 329 1594 4.84 19.20
target 2D structure prediction score : 0.45
Monomeric hydrophicity matching model chain I : 0.63

3D Compatibility (PKB) : 4.84
2D Compatibility (Sec. Struct. Predict.) : 0.45
1D Compatibility (Hydrophobicity) : 0.63
QMean score : 0.405

(partial model without unconserved sides chains):
PDB file : Tito_3N9U.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3N9U-query.scw
PDB file : Tito_Scwrl_3N9U.pdb: