Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNAIPTLTPLAMPCNSSFEAKDWEILSSHWYPVARIQDVSTAPQRVKLLDVNMALYKTESGEIHLVRDICPHRGVPLTKGWVDGEEIVCPYHGLRYNTEGKCTQIPAQPELTKISDRFSLTKFPVVQRYGLIWTSIHGRDIAKANIPVLDTWDDAEHQAILPPFVDIGGSSGRQLEGFIDVAHFAWVHHNAFANRDNPIVPKYHTERTNYGLKTVYISNVSNYPHELKHLEPEGFLWKRTFEVYPPFSAVLTVDFPEDGILKILNACCPISSNKTRLFVPLTRNFDQTGDLEKVYAFNAQIFAEDQDMVESQKPEELPLDLMMEAHFEADRSSTTYRRILAEWGLSKRYTV
3GL0 Chain:C ((9-134))-----------------------------WYVAALPEELSEKPLGRTILDTPLALYRQPDGVVAALLDICPHRFAPLSDGILVNGHLQCPYHGLEFDGGGQCVHNPHGNGARPAS--LNVRSFPVVERDALIW--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3GL0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain C - contact count / total energy / energy per contact / energy per residue : 481 -61665 -128.20 -604.56
target 2D structure prediction score : 0.71
Monomeric hydrophicity matching model chain C : 0.58

3D Compatibility (PKB) : -128.20
2D Compatibility (Sec. Struct. Predict.) : 0.71
1D Compatibility (Hydrophobicity) : 0.58
QMean score : 0.559

(partial model without unconserved sides chains):
PDB file : Tito_3GL0.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3GL0-query.scw
PDB file : Tito_Scwrl_3GL0.pdb: