Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMGKVNKTDREWQRELSPEEYRITRQKGTEPAFTGQYWNTKQHGTYVCRCCGAELFSSDAKYDSGCGWPSFFRPLNGSVIDEHEDLTHGMVRTEIVCHDCEAHLGHVFEDGPQP-TGLRYCVNSASLQLKTQEKNDEGTYP
3HCG Chain:B ((3-139))---KKPSDAELKRTLTEEQYQVTQNSATEYAFSHEYDHLFKPGIYVDVVSGEPLFSSADKYDSGCGWPSFTRPIDAKSVTEHDDFSYNMRRTEVRSHAADSHLGHVFPDGPRDKGGLRYCINGASLKFIPLEQMDAAGYG


General information:
TITO was launched using:
RESULT:

Template: 3HCG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 684 -20938 -30.61 -153.95
target 2D structure prediction score : 0.67
Monomeric hydrophicity matching model chain B : 0.83

3D Compatibility (PKB) : -30.61
2D Compatibility (Sec. Struct. Predict.) : 0.67
1D Compatibility (Hydrophobicity) : 0.83
QMean score : 0.458

(partial model without unconserved sides chains):
PDB file : Tito_3HCG.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3HCG-query.scw
PDB file : Tito_Scwrl_3HCG.pdb: