Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNVLRVPIALRLFLTVLLTTLLIATASLSVLHWTMQKNFAKYVADVEMQKLDRLITNLGNVYTVYHDWGNAIQAQILQIEGTAAPDDYDRLSQWWLRRQYDIAIQQHSFDEHTLINISPDAGTVNKNSIFSDEELRTLEQNLPSEYQPFEGLRFPLSANQFRPSDDKNKSKKGSLKDIETQNGKKRFIALPDRLGLSSRLSLYDAKHQFVVGEPPSSDQMSNRPIMVNSQVVGYLGLKPVLDKEDALSINFFSNQKRYLLLIYALTLLSSLVAALLMATYFKKLIQRLLNATNELTKGNYQHQVVIKRNDELGDLSTQLNHLAEILHQHEESRRQWVADTSHELKTPLAVLQAQIEAMQDGIRKATPEHLDAMMRQVSSLKKLTQDLADLAQADAQQLKCYLSSVNPWEVILQEVENFRPKLEQAGLEIEVEGE--GASLLLDRDRFKQIIVNLIGNSIRYTETGGKIHIHTNQTPQEWTLYVDDSPFGLSDEQLSRLGERFYRVDDSRTRSTGGTGLGLALSCKIAQALGGTLSFEHSPLGGLRCVLTFKKQS
4BIX Chain:B ((64-295))----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ASFNQVVTALERMMTSQQRLLSDISHELRTPLTRLQLGTALLRRRSGE--SKELERIETEAQRLDSMINDLLVMSRNQQKN-ALVSETIKANQLWSEVLDNAAFEAEQMGKSLTVNFPPGPWPLYGNPNALESALENIVRNALRYSH--TKIEVGFAVDKDGITITVDDDGPGVSPEDREQIFRPFYRTD--------GTGLGLAIVETAIQQHRGWVKAEDSPLGGLRLVIWLPLY-


General information:
TITO was launched using:
RESULT:

Template: 4BIX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 838 -2665 -3.18 -12.00
target 2D structure prediction score : 0.70
Monomeric hydrophicity matching model chain B : 0.61

3D Compatibility (PKB) : -3.18
2D Compatibility (Sec. Struct. Predict.) : 0.70
1D Compatibility (Hydrophobicity) : 0.61
QMean score : 0.582

(partial model without unconserved sides chains):
PDB file : Tito_4BIX.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4BIX-query.scw
PDB file : Tito_Scwrl_4BIX.pdb: