Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMRTLSMNYLQDARQHVLQQIRTACELAQREPETVQLLAVSKTHPSERLREMYAAGQRAFGENYLQEALDKIDAL-------Q--------DLDIEWHFIGHVQRNKTKHLAEKFDWVHGVDRLIIAERLSNQRGDDQAALNICLQVNIDGQESKDGCAPEDVAELVAQMSQLPKIKLRGLMVIPAPDNT-----GAFADAKKLFDAVKVQHAH--PEDWDTLSMGMSSDLEAAIAAGSTMVRVGTALFGARDYSQKG
3CPG Chain:A ((21-268))----RAREITDGVHRVLDRIAAAEEQAGREAGSVRLLAATKTRDIGEIMAAIDAGVRMIGENRPQEVTAKAEGLARRCAERGFSLGVAAAE-HIPFHLIGQLQSNKIGKVLPVVDTIESVDSIDLAEKISRRAVARGITVGVLLEVNESGEESKSGCDPAHAIRIAQKIGTLDGIELQGLMTIGAHVHDETVIRRGFSHLRKTRDLILASGEPGTD-RCRELSMGMTGDMELAIAEGSTIVRVGTAIF---------


General information:
TITO was launched using:
RESULT:

Template: 3CPG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1030 -11482 -11.15 -52.19
target 2D structure prediction score : 0.64
Monomeric hydrophicity matching model chain A : 0.76

3D Compatibility (PKB) : -11.15
2D Compatibility (Sec. Struct. Predict.) : 0.64
1D Compatibility (Hydrophobicity) : 0.76
QMean score : 0.616

(partial model without unconserved sides chains):
PDB file : Tito_3CPG.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3CPG-query.scw
PDB file : Tito_Scwrl_3CPG.pdb: