Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMAAMASLGALALLLLSSLSRCSAEACLEPQITPSYYTTSDAVISTETVFIVEISLTCKNRVQNMALYADVGGKQFPVTR---GQDVGRYQVSWSLDHKSAHAGTYEVRFFDEESYSLLRKAQRNNEDISIIPPLFTVSVDHRGTWNGPWVSTEVLAAAIGLVIYYLAFSAKSHIQA
1NKR Chain:? ((102-200))--------------------------IGLYEKPSLSAQPGPTVLAGE----NVTLSCSSRSSYDMYHLSREGEAHERRLPAGPKVNGTFQADFPLGPAT-HGGTYRCFGSFHDSPYEWSK-SSDPLLVSVT---------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 1NKR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 477 4536 9.51 47.24
target 2D structure prediction score : 0.60
Monomeric hydrophicity matching model chain A : 0.52

3D Compatibility (PKB) : 9.51
2D Compatibility (Sec. Struct. Predict.) : 0.60
1D Compatibility (Hydrophobicity) : 0.52
QMean score : 0.510

(partial model without unconserved sides chains):
PDB file : Tito_1NKR.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1NKR-query.scw
PDB file : Tito_Scwrl_1NKR.pdb: