Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSSRGGKKKSTKTSRSAKAGVIFPVGRMLRYIKKGHPKYRIGVGAPVYMAAVLEYLTAEILELAGNAARDNKKGRVTPRHILLAVANDEELNQLLKGVTIASGGVLPNIHPELLAKKRGSKGKLEAIITPPPAKKAKSPSQKKPVSKKAGGKKGARKSKKKQGEVSKAASADSTTEGTPADGFTVLSTKSLFLGQKLNLIHSEISNLAGFEVEAIINPTNADIDLKDDLGNTLEKKGGKEFVEAVLELRKKNGPLEVAGAAVSAGHGLPAKFVIHCNSPVWGAD---KCEELLEKTVKNCLALADDKKLKSIAFPSIGSGRNGFPKQTAAQLILKAISSYFVSTMSSSIKTVYFVLFDSESIGIYVQEMAKLDAN
3Q6Z Chain:A ((27-213))----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CFSRTVLAPGVVLIVQQGDLAR---LPVDVVVNASNEDLKHYGGLAAALSKAAGPELQADCDQIVKREGRLLPGNATISKAGKLPYHHVIHAVGPRWSGYEAPRCVYLLRRAVQLSLCLAEKYKYRSIAIPAISSGVFGFPLGRCVETIVSAIKENFQFKK-HCLKEIYLVDVSEKTVEAFAEAVKTVF--


General information:
TITO was launched using:
RESULT:

Template: 3Q6Z.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1031 -71786 -69.63 -394.43
target 2D structure prediction score : 0.65
Monomeric hydrophicity matching model chain A : 0.64

3D Compatibility (PKB) : -69.63
2D Compatibility (Sec. Struct. Predict.) : 0.65
1D Compatibility (Hydrophobicity) : 0.64
QMean score : 0.546

(partial model without unconserved sides chains):
PDB file : Tito_3Q6Z.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3Q6Z-query.scw
PDB file : Tito_Scwrl_3Q6Z.pdb: