Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMPLRKMKIPFLLLFFLWEAESHAASRPNIILVMADDLGIGDPGCYGNKTIRTPNIDRLASGGVKLTQHLAASPLCTPSRAAFMTGRYPVRSGMASWSRTGVFLFTASSGGLPTDEITFAKLLKDQGYSTALIGKWHLGMSCHSKTDFCHHPLHHGFNYFYGISLTNLRDCKPGEGSVFTTGFKRLVFLPLQIVGVTLLTLAALNCLGLLHVPLGVFFSLLFLAALILTLFLGFLHYFRPLNCFMMRNYEIIQQPMSYDNLTQRLTVEAAQFIQRNTETPFLLVLSYLHVHTALFSSKDF---------------------------------------------------AGKSQHGVYGDAVEEMDWSVGQILNLLDELRLANDTLIYFTSDQGAHVEEVSSKGEIHGGSNGIYKGGKANNWEGGIRVPGILRWPRVIQAGQKIDEPT--SNMDIFPTVAKLAGAPLPEDRIIDGRDLMPLLEGKSQRSDHEFLFHYCNA-------YLNAVRWHPQNSTSIWKAFFFTPNFNPVGSNGCFATHVCFCFGSYVTHHDPPLLFDISKDPRERNPLTPAS--EPRFYEILKVMQEAADRHTQTLPEVPDQFSWNNFLWKPWLQLCCPSTGLSCQCDREKQDKRLSR
5G2U Chain:A ((22-450))------------------------EKPNFLIIQCDHLTQRVVGAYGQTQGCTLPIDEVASRGVIFSNAYVGCPLSQPSRAALWSGMMPHQTNVRSNSSEP------VNTRLPENVPTLGSLFSESGYEAVHFGKTHDMGS------------LRGFKHKEPVAKP-F----T-----------DP-------------------------------------------EFPV----------------------NNDSFLDVGTCEDAVAYLSNP--EPFICIADFQNPHNICGFIGENAGVHTDRPISGPLPELPDNFDVEDWSNIPTPVQYICCSHRRMTQAAHWNEENYRHYIAAFQHYTKMVSKQVDSVLKALYSTPAGRNTIVVIMADHGDGMASHRMV------------TKHISFYDEMTNVPFIFAGPGIKQQKKPVDHLLTQPTLDLLPTLCDLAGIAVPA--EKAGISLAPTLRGEKQKKSHPYVVSEWHSEYEYVTTPGRMV------RGPRYKYTHYL-------------------------EGNGEELYDMKKDPGERKNLAKDPKYSKILAEHRALLDDYIT------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 5G2U.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 2286 -33390 -14.61 -91.48
target 2D structure prediction score : 0.64
Monomeric hydrophicity matching model chain A : 0.61

3D Compatibility (PKB) : -14.61
2D Compatibility (Sec. Struct. Predict.) : 0.64
1D Compatibility (Hydrophobicity) : 0.61
QMean score : 0.461

(partial model without unconserved sides chains):
PDB file : Tito_5G2U.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5G2U-query.scw
PDB file : Tito_Scwrl_5G2U.pdb: