Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceFVNTTESCEVERLFKATSPRGEPQDGLYCIRNSSTKSGK-VLVVWDET---SNKVRNYRIFEK-DSKFYLEGEVLFVSVGSMVEHY
4D8K Chain:A ((81-158))----LSRKDAERQLLA----PGNTHGSFLIRESESTAGSFSLSVRDFDQNQGEVVKHYKIRNLDNGGFYISPRITFPGLHELVRHY


General information:
TITO was launched using:
RESULT:

Template: 4D8K.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 229 5221 22.80 71.52
target 2D structure prediction score : 0.74
Monomeric hydrophicity matching model chain A : 0.73

3D Compatibility (PKB) : 22.80
2D Compatibility (Sec. Struct. Predict.) : 0.74
1D Compatibility (Hydrophobicity) : 0.73
QMean score : 0.499

(partial model without unconserved sides chains):
PDB file : Tito_4D8K.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4D8K-query.scw
PDB file : Tito_Scwrl_4D8K.pdb: