Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software) Input alignment information: Query sequence MKLYNKSELRYSRIFFDKRPPAFAFILIISTAIILSGALVGAAYIPKNYIVKANGNSVITGTEFLSAISSGKVVTLHKSEGDMVNAGDVIISLSSGQEGLQASSLNKQLVKLRAKEAIFQKFEQSLNEKYNRMSNSGEEQEYYGKVEYYLSQLNSENYNNGTQYSKIQDEYTKLNKITAERNQLDADLQTLQNELIQLQQQGDSPSLSDTTSADDKAKLETKILEITTKIEALKTNITSKNSEIDSQQSNIKDMNRTYNDPTSQAYNIYAQLVSELGTARSNNNKSITELEANLGVATGQDKAHSILAPNEGTLHYLVPLKQGMSIQQGQT--IAEVSGKEKGYYVEAFVLASDISRVSK----GA---------KVDVAITGVNSQKYGTLKGQVRQIDSGTISQETKEGNISLYKVMIELETLTLKHGSETVVLQKDMPVEVRIVYDKETYLDWILEMLSFKQ 1VF7 Chain:J ((26-260)) -----------------------------------------------TLNTELPGRTNAFRIAEVRPQVNGIILKRLFKEGSDVKAGQQLYQIDPATYEADYQSAQANLASTQEQAQR----------------------------------------------------------------------------YKLLVADQAVS----------------------------KQQ-------------------------------------------YADANAAYLQSKAAVEQARINLRYTKVLSPISGRIGRS-AVTEGALVTNGQANAMATVQQL-DPIYVDVTQPSTALLRLRRELASGQLERAGDNAAKVSLKLEDGS---QYPLEGRLEFSEVSVDEG------TGSVTIRAVFPNP-------NNELLPGMFVHAQLQ------------------

General information: TITO was launched using: RESULT: Template: 1VF7.pdb Alignment : align.pir Tito was launched with SMD and SCWRL Tito text output Monomeric PKB - chain J - contact count / total energy / energy per contact / energy per residue : 848 -4033 -4.76 -18.33 target 2D structure prediction score : 0.54 Monomeric hydrophicity matching model chain J : 0.60 3D Compatibility (PKB) : -4.76 2D Compatibility (Sec. Struct. Predict.) : 0.54 1D Compatibility (Hydrophobicity) : 0.60 QMean score : 0.361

(partial model without unconserved sides chains): PDB file : Tito_1VF7.pdb: (Unconserved sides chains are recalculated) : Sequence: align-1VF7-query.scw PDB file : Tito_Scwrl_1VF7.pdb: