Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MWKEIRKRGFKN-------KAFRTLEDVMNQLQDVIQGLEKEVIKSIVNRRWTRMLFENR------------------------------------------------------------------------------------------------------------------------------
4O5J Chain:A ((27-400))LKNLNEKYEQLSQYLNQVASLKQSIQNANNIELVNSSLNYLKSFTNNNYNSTTQSPIFNAVQAVITSVLGFWSLYAGNYFTFFVGKKVDSGQPASVQGNPPFKTIIENCSGIENCAMDQTTYDKMKKLAEDLQAAQTNSATKGNNLCALSGCAATSNPPNSTVSNALNLAQQLMDLIANTKTAMMWKNIVISGVSNTSGAITSTNYPTQYAVFNNIKAMIPILQQAVTLSQSNHTLSASLQAQATGSQTNPKFAKDIYTFAQNQKQVISYAQDIFNLFNSIPAEQYKYLEKAYLKIPNAGSTPTNPYRQVVNLNQEVQTIKNNVSYYGNRVDAALSVARDVYNLKSNQAEIVTAYNDAKTLSEEISKLPH


General information:
TITO was launched using:
RESULT:

Template: 4O5J.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 19 1833 96.47 34.58
target 2D structure prediction score : 0.72
Monomeric hydrophicity matching model chain A : 0.55

3D Compatibility (PKB) : 96.47
2D Compatibility (Sec. Struct. Predict.) : 0.72
1D Compatibility (Hydrophobicity) : 0.55
QMean score : 0.332

(partial model without unconserved sides chains):
PDB file : Tito_4O5J.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4O5J-query.scw
PDB file : Tito_Scwrl_4O5J.pdb: