Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKASPHRPTKALIHLGAIRQNIQQMGAHIPQGTLKLAVVKANAYGHGAVAVAKAIQDD-VDGFCVSNIDEAIELRQAGLSKPILILGVSEIEAVALAKEYDFTLTVAGLEWIQALLDKEVDLTG--LTVHLKIDSGMGRIGFREASEVEQAQDLLQQHGVCV-EGIFTHFATADEESDDYFNAQLERFKTILASMKEVPELVHASNSATTLWHVETIFNAVRMGDAMYGLNPSGAVLD-LPYDLIPALTLESALVHVKTVPAGACMGYGATYQADSEQVIATVPIGYADGWTRDMQNFSVLVDGQACPIVGRVSMDQITIRLPKLYPLGTKVTLIGSNGDKEITATQVATYRVTINYEVVCLLSDRIPREYY
3OO2 Chain:B ((5-372))-SDKYYRSAYMNVDLNAVASNFKVFSTLHPNKTV-MAVVKANAYGLGSVKVARHLMENGATFFAVATLDEAIELRMHGITAKILVLGVLPAKDIDKAIQHRVALTVPSKQWLKEAIK---NIS-KKLWLHIKLDTGMGRLGIKDTKTYQEVIEIIQQYEQLVFEGVFTHFACADEPGD-MTTEQYQRFKDMVNEAIK-PEYIHCQNSAGSLLMDCQFCNAIRPGISLYGYYPSEYVQQKVKVHLKPSVQLIANVVQTKTLQA-------------DPTTIALLPIGYADGYLRIMQGSFVNVNGHQCEVIGRVCMDQTIVKVPDQVKAGDSVILIDNHRESPQSVEVVAEKQHTINYEVLCNLSRRLPRIYH


General information:
TITO was launched using:
RESULT:

Template: 3OO2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 1947 -43570 -22.38 -125.92
target 2D structure prediction score : 0.58
Monomeric hydrophicity matching model chain B : 0.77

3D Compatibility (PKB) : -22.38
2D Compatibility (Sec. Struct. Predict.) : 0.58
1D Compatibility (Hydrophobicity) : 0.77
QMean score : 0.621

(partial model without unconserved sides chains):
PDB file : Tito_3OO2.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3OO2-query.scw
PDB file : Tito_Scwrl_3OO2.pdb: