Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMAKNVVITGATSGIGEAIARAYLEQGEDVVLTGRRIDRLEILKSEFAVSFPNQTVWTFPLDVTDMVMVKTVCSDILETIGRIDILVNNAGLALDLAPYQDYEELDMLTMLDTNVKGLMAVTHCFLPAMIKVNQGHIINMGSTAGIYAYAGAAVYSATKAAVKTFSDGLRIDTIATDIKVTTIQPGIVETDFSTVRFHGDKERAASVYQGIEALQAQDIADTVVYVTSQPRRVQITDMTIMANQQATGFMIHKK
3TFO Chain:D ((3-235))MDKVILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATE--IRDAGGTALAQVLDVTDRHSVAAFAQAAVDTWGRIDVLVNNAGV-MPLSPLAAVKVDEWERMIDVNIKGVLWGIGAVLPIMEAQRSGQIINIGSIGALSVVPTAAVYCATKFAVRAISDGLRQES--TNIRVTCVNPGVVE--------------------AI-ALQPADIARAVRQVIEAPQSVDTTEITI--------------


General information:
TITO was launched using:
RESULT:

Template: 3TFO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain D - contact count / total energy / energy per contact / energy per residue : 1152 -150132 -130.32 -704.85
target 2D structure prediction score : 0.64
Monomeric hydrophicity matching model chain D : 0.79

3D Compatibility (PKB) : -130.32
2D Compatibility (Sec. Struct. Predict.) : 0.64
1D Compatibility (Hydrophobicity) : 0.79
QMean score : 0.488

(partial model without unconserved sides chains):
PDB file : Tito_3TFO.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3TFO-query.scw
PDB file : Tito_Scwrl_3TFO.pdb: