Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMRALIQRVLEAKVEVDGQTTGE--------IKKGLLVFLGLGKEDTLEKGQKLIDKILKYRIFDDEQGKMGWNVSQANGGVLLVSQFTLMAQTQKGLRPDFGPAMPPSDAKALYEQLVEYTRSQFEN--VQTGIFAADMKVHLINDGPVTFNLT
5J61 Chain:F ((1-152))MRVVIQRVKGAILSVR------KELEIISEIKNGLICFLGIHKNDTWEDALYIIRKCLNLRLWNNDNKTWDKNVKDLNYELLIVSQFTLFGNTKKGNKPDFHLAKEPNEALIFYNKIIDEFKKQYNDDKIKIGKFGNYMNIDVTNDGPVT----


General information:
TITO was launched using:
RESULT:

Template: 5J61.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain F - contact count / total energy / energy per contact / energy per residue : 576 -10560 -18.33 -78.80
target 2D structure prediction score : 0.60
Monomeric hydrophicity matching model chain F : 0.80

3D Compatibility (PKB) : -18.33
2D Compatibility (Sec. Struct. Predict.) : 0.60
1D Compatibility (Hydrophobicity) : 0.80
QMean score : 0.513

(partial model without unconserved sides chains):
PDB file : Tito_5J61.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5J61-query.scw
PDB file : Tito_Scwrl_5J61.pdb: