Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTVAMSIMISTEEIQAKVKELGEQINSHYANSDKELVLIGLLRGSVIFMADLCRTITKPHELDFMTVSSYGGGTTSSRDVKILKDLDGEIRGKDVLVVEDIIDSGNTLSKVVEMLQTREPNSIQLCTLVCKPSRREIDLEVKFLGFEVEDKFIVGYGLDYDQKYRHLPFIGEIGL
1G9T Chain:B ((5-179))MKHTVEVMIPEAEIKARIAELGRQITERYKDSGSDMVLVGLLRGSFMFMADLCREVQVSHEVDFMTASS--------RDLKILKDLDEDIRGKDVLIVEDIIDSGNTLSKVREILSLREPKSLAICTLLDKPSRREVNVPVEFIGFSIPDEFVVGYGIDYAQRYRHLPYIGKVIL


General information:
TITO was launched using:
RESULT:

Template: 1G9T.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 856 -140995 -164.71 -844.28
target 2D structure prediction score : 0.68
Monomeric hydrophicity matching model chain B : 0.89

3D Compatibility (PKB) : -164.71
2D Compatibility (Sec. Struct. Predict.) : 0.68
1D Compatibility (Hydrophobicity) : 0.89
QMean score : 0.656

(partial model without unconserved sides chains):
PDB file : Tito_1G9T.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1G9T-query.scw
PDB file : Tito_Scwrl_1G9T.pdb: