Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSQEEKLPKILIVEDDERLARLTQEYLIRNGLEVGVETDGNRAIRRIISEQPDLVVLDVMLPGADGLTVCREVRPHYHQPILMLTARTEDMDQVLGLEMGADDYVAKPVQPRVLLARIRALLRRTDKTVEDEVAQRIEFDDLVIDNGGRSVTLNGELVDFTSAEYDLLWLLASNAGRILSREDIFERLRGIEYDGQDRSIDVRISRIRPKIGDDPENPKRIKTVRSKGYLFVKETNGL
4NHJ Chain:B ((16-113))--------------------------------------------------------------------------------------------------------------------------------------KTISFGSLTIDPVNRQVMLGGENVALSTADFDMLWELATHAGQIMDRDALLKNLRGVTYDGMDRSVDVAISRLRKKLLDNATEPYRIKTVRNKGYLFA------


General information:
TITO was launched using:
RESULT:

Template: 4NHJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 368 -53256 -144.72 -543.42
target 2D structure prediction score : 0.47
Monomeric hydrophicity matching model chain B : 0.66

3D Compatibility (PKB) : -144.72
2D Compatibility (Sec. Struct. Predict.) : 0.47
1D Compatibility (Hydrophobicity) : 0.66
QMean score : 0.611

(partial model without unconserved sides chains):
PDB file : Tito_4NHJ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4NHJ-query.scw
PDB file : Tito_Scwrl_4NHJ.pdb: