Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMRFKDMKRGNLMKKISNEIQILAETLTLPKVVIEQMIVQAKNILDEVFEQYSHELMDPNKAKATAKKIDKVYEEEPFAALAIYLYAASQ----SWKKIYQPLKIPRTIYLATMNAFTRFIHEHFQVTGSYRFDRGFWIWHYTSGLIFRIGELEYEMTYFPKGYTDLRLEGKQCLSLHIPSDADLSQNKIRDSYESAIRFFELYFPDYHYQVMYTDTWLLSPNLTKWLKKESKICLFAADYRLLSVDEQDDSGVPWIFGRVDAQIHDYPESTSLQRQAKEQLLAGEHIGSGLGILTS
3M03 Chain:A ((2-94))-----------------------SNIGIRDLAVQFSCIEAVNMASKILKSYESSLPQTQQVDLD-------LSRPLFTSAALLSACKILKLKVDKNKMVATSGVKKAIFDRLCKQLEKIGQQV-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3M03.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 327 -44934 -137.41 -504.87
target 2D structure prediction score : 0.61
Monomeric hydrophicity matching model chain A : 0.56

3D Compatibility (PKB) : -137.41
2D Compatibility (Sec. Struct. Predict.) : 0.61
1D Compatibility (Hydrophobicity) : 0.56
QMean score : 0.613

(partial model without unconserved sides chains):
PDB file : Tito_3M03.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3M03-query.scw
PDB file : Tito_Scwrl_3M03.pdb: