Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNEEQELQRGLKNRHVQLISIGGAIGTGLFLGSGKSIQLAGPSILLAYLITGCICFFIMRALGELLLSNTNNHSFLDFVAEYLGKKA-AFITGWTYWFCWVSIAMADLTAIGMYVRYWAPG-VP---QWLPELIALGLLLCLNMVAVSLFGELEFWFALIKVVAIIAFILVGAYMILTHYTTDIGTASITNLWSHGGFFPTGAKGFILAFQMVTFAFAGIELVGLVAGETENPEKVLPEAINNIPIRIILFYLGSLFVIMAIYPWNSLNP-DNSPFVEVFSEIGITIAASLINLVVLSAAASACNSAIYSTGRMLRSLAQEGSAPKKFK-KLTTHHVPGNALTFSTIVIFISVILNYVMPSEVFTLVSSIATTCFLFIWSMLVYTHMKYRKSILGKKAHSFKMPLYPFSNYLVFLYMAFVCVVLFLGKDTRIALLLTPVWFLLLLLIYHMKYERKK
3GI9 Chain:C ((2-370))----ELKNKKLSLWEAVSMAVGVMIGASIFSIFGVGAKIAGRNLPETFILSGIYALLVAYSYTKLGAKIVSNAGPIAFIHKAIGDNIITGALSILLWMSYVISIALFAKGFAGYFLPLI-APINTFNIAITEIGIVAFFTALNFFGSKAVGRAEFFIVLVKLLILGLFIFAGLIT-----------IHPSYVI--PDLAPSAVSGMIFASAIFFLSYMGFGVITNASEHIENPKKNVPRAIFISILIVMFVYVGVAISAIGNLPIDELIKASENALAVAAKPFLGNLGFLLISIGALFSISSAMNATIYGGANVAYSLAKDGELPE-FFERKVWFKST-EGLYITSALGVLFALL------FNMEGVASITSAVFMVIYLFVILSHYILIDEVG--------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3GI9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain C - contact count / total energy / energy per contact / energy per residue : 1982 -243616 -122.91 -674.84
target 2D structure prediction score : 0.68
Monomeric hydrophicity matching model chain C : 0.68

3D Compatibility (PKB) : -122.91
2D Compatibility (Sec. Struct. Predict.) : 0.68
1D Compatibility (Hydrophobicity) : 0.68
QMean score : 0.385

(partial model without unconserved sides chains):
PDB file : Tito_3GI9.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3GI9-query.scw
PDB file : Tito_Scwrl_3GI9.pdb: