Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMMGSKKQEEIMKITIPKNFILGAASSAWQTEGWKGKKEGQDSFIDSWYKNEHFVWHNGYGPAVATNFMEQYQQDVDLMKSIHLTHYRTSINWARFFTDYENCIVDEEYAQHISEMIDSLIEADVEPMICLEHYEVPAFLLEKYDGWSSRKVVDFYAKYAQIAFDRYGDRVKNWFTFNEPIVPQTRCYLDAVRWPHEQNTKKWMMWNYHKVLATAKAVEIYRSGNYGGRIGCILNPEMVYARSNSPEDQKAAYMYDLFYNRVFFDPMVKGYYTEEFLELCQK--QSIYFDPATEDLETIQHHTVDFLGINQYYPKRVRAPRYQWNEETPFHPERYYEVFDLPGKKMNNSRGWEIYPKIMYDIAMYLKENYH-NIPWLITENGMGREYEEQYMDEKGIVQDDYRIEFIGQHLHYLIKATEEGANCEGYMLWAFTDCVSPMNAFKNRYGLVRIELNDERSRTLKKSASWYQTLIDKRELDLPDEIYK
2O9R Chain:A ((8-451))----------NTFIFPATFMWGTSTSSYQIEGGTDEGGRTPSIWDTFCQIPGKV-IGGDCGDVACDHFHHFKEDVQLMKQLGFLHYRFSVAWPRIMPAA-G-IINEEGLLFYEHLLDEIELAGLIPMLTLYHWDLPQWIEDE-GGWTQRETIQHFKTYASVIMDRFGERINWWNTINEPYCASILGYGTGEHAPGHENWREAFTAAHHILMCHGIASNLHKEKGLTGKIGITLNMEHVDAASERPEDVAAAIRRDGFINRWFAEPLFNGKYPEDMVEWYGTYLNGL-DFVQPGDMELIQ-QPGDFLGINYYTRSIIRSTNDASLLQ--------VEQVHMEE--PVTDMGWEIHPESFYKLLTRIEKDFSKGLPILITENGAAMRDELV----NGQIEDTGRQRYIEEHLKACHRFIEEGGQLKGYFVWSFLDNFEWAWGYSKRFGIVHINYET-QERTPKQSALWFKQMMAKNG---------


General information:
TITO was launched using:
RESULT:

Template: 2O9R.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 2624 -134667 -51.32 -305.37
target 2D structure prediction score : 0.59
Monomeric hydrophicity matching model chain A : 0.75

3D Compatibility (PKB) : -51.32
2D Compatibility (Sec. Struct. Predict.) : 0.59
1D Compatibility (Hydrophobicity) : 0.75
QMean score : 0.516

(partial model without unconserved sides chains):
PDB file : Tito_2O9R.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2O9R-query.scw
PDB file : Tito_Scwrl_2O9R.pdb: