Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMIRGRTKMNKLNILFVCGAGLGSSFAAQMSAEDVLNKLGVEAKLDHCDISSAVS--MKPDVIITAENFRSQFEKFA-VDPKTAMIYLK----NIVSKNEIEEKITPVLQDKGVI
2WWV Chain:D ((3-104))---------KKHIYLFSSAGMS-TSLLVSKMRAQAEKYEVPVIIEAFPETLAGEKGQNADVVLLGPQIAYMLPEIQRLLPNKPVEVIDSLLYGKVDGLGVLKAAVAAIKKAA--


General information:
TITO was launched using:
RESULT:

Template: 2WWV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain D - contact count / total energy / energy per contact / energy per residue : 436 -19706 -45.20 -207.43
target 2D structure prediction score : 0.69
Monomeric hydrophicity matching model chain D : 0.66

3D Compatibility (PKB) : -45.20
2D Compatibility (Sec. Struct. Predict.) : 0.69
1D Compatibility (Hydrophobicity) : 0.66
QMean score : 0.472

(partial model without unconserved sides chains):
PDB file : Tito_2WWV.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2WWV-query.scw
PDB file : Tito_Scwrl_2WWV.pdb: