Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMISMKVVFHIDEL--E--KWSETGKNVKNLIKASPETTI-VVSVNGIAITGYLDSAN--------AEF---LDLQ-GVVFHACANAMRANHISES-----------SLPEQVIVVPAGVLDLVELQSQGYAYIKP
2HYB Chain:J ((3001-3127))---MKFALQINEGPYQHQASDSAYQFAKAALEK--GHEIFRVFFYHDGVNNSTRLTTPPQDDRHIVNRWAELAEQYELDMVVCVAAAQRRGIVDEGEASRNGKDATNIHPKFRI--SGLGQLVEAAIQADRLVV-


General information:
TITO was launched using:
RESULT:

Template: 2HYB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain J - contact count / total energy / energy per contact / energy per residue : 373 -12253 -32.85 -123.77
target 2D structure prediction score : 0.61
Monomeric hydrophicity matching model chain J : 0.65

3D Compatibility (PKB) : -32.85
2D Compatibility (Sec. Struct. Predict.) : 0.61
1D Compatibility (Hydrophobicity) : 0.65
QMean score : 0.536

(partial model without unconserved sides chains):
PDB file : Tito_2HYB.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2HYB-query.scw
PDB file : Tito_Scwrl_2HYB.pdb: