Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMAELKQEWINTAIEALDKAYVPYSHFPVGACLVTESGKIYQGINIENASFGLTNCAERTAFFKAVSEGEK--TFTHLVVAGHTPDPISPCGACRQVMAEFCSPDMPVTLVGDNGVTKATTVRALLPYAFTEKDL
3DMO Chain:D ((28-135))---------------------PYSNFKVGAALVTNDGKVFHGCNVENASYGLCNCAERTALFSALAAGYRPGEFAAIAVVGETHGPIAPCGACRQVMIELGKPTLEVVLTNMQGDVRVTSAGDLLPDAF-----


General information:
TITO was launched using:
RESULT:

Template: 3DMO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain D - contact count / total energy / energy per contact / energy per residue : 502 -19995 -39.83 -188.63
target 2D structure prediction score : 0.73
Monomeric hydrophicity matching model chain D : 0.79

3D Compatibility (PKB) : -39.83
2D Compatibility (Sec. Struct. Predict.) : 0.73
1D Compatibility (Hydrophobicity) : 0.79
QMean score : 0.587

(partial model without unconserved sides chains):
PDB file : Tito_3DMO.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3DMO-query.scw
PDB file : Tito_Scwrl_3DMO.pdb: