Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software) Input alignment information: Query sequence MKQEMMEIVQQKQLAPKIFEMTLKGDL--VKEMQQPGQFLHILVPRADLLLRRPISLNHIDHETNTCRIIYRVE--GEGT-RVF-STLSAGDHLDVMGPLGNGFDLSNLHTGDEVFIIGGGIGVPPLYELSKQLVEKG-IKPTHFLGFATHEVVYYEKEFNRL---GETRIATDDGTYGMHGN--VGNLLLGTKTEPTAVFACGSNGLLKTVEQLFSSH----Q--N----------------V----------------------QLSLESRMACGIGACYACVCHTPEDET-----------GTKSVKVCDEGPIFKIGEVII 2PIA Chain:A ((7-313)) -GFLRLKIASKEKIARDIWSFELTDPQGAPLPPFEAGANLTVAVPN---GSRRTYSLCNDSQERNRYVIAVKRDSNGRGGSISFIDDTSEGDAVEVSLPRNE-FPLDKR--AKSFILVAGGIGITPMLSMARQLRAEGLRSFRLYYLTRDPEGTAFFDELTSDEWRSDVKIHHDHGDP--TKAFDFWSVFEKS-KPAQHVYCCGPQALMDTVRDMTGHWPSGTVHFESFGATNTNARENTPFTVRLSRSGTSFEIPANRSILEVLRDANVRVPSSCESGTCGSCKTALCSGEADHRDMVLRDDEKGTQIMVCVSRAK--------

General information: TITO was launched using: RESULT: Template: 2PIA.pdb Alignment : align.pir Tito was launched with SMD and SCWRL Tito text output Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1160 -3842 -3.31 -16.01 target 2D structure prediction score : 0.56 Monomeric hydrophicity matching model chain A : 0.67 3D Compatibility (PKB) : -3.31 2D Compatibility (Sec. Struct. Predict.) : 0.56 1D Compatibility (Hydrophobicity) : 0.67 QMean score : 0.414

(partial model without unconserved sides chains): PDB file : Tito_2PIA.pdb: (Unconserved sides chains are recalculated) : Sequence: align-2PIA-query.scw PDB file : Tito_Scwrl_2PIA.pdb: