Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTRSSHRKKSKHVALLSVLGVLLVLISFYTYRSTYYTKHFLPNTEINGINVSNLTVEKANEKLKEAYSDKKLAIKEDGKVWQEVPKSELGYKDDFTSELSPILNEQNGWTWGMTYVSAAEKQEIDPVSQNHQKLDTTVQTLTTKLTDLNKDRTPTTDATIEKAGDSFVIKPEVNGNTIDVDAAVKQLKSAVNSGKDTIELTEFKEKPKVTSEDSSLKEQLASMNAIANVKATYSINGETFQIPSSDIMSWLTYNDGKVDLDTEQVRQYVTDLGTKYNTSTNDTKFKSTKRGEVTVPVGTYSWTIQTDSETEALKKAILAGQDFTRSPIVQGGTTADHPLIEDTYIEVDLENQHMWYYKDGKVALETDIVSGKPTTPTPAGVFYVWNKEEDATLKGTND-----DGTPYESPVNYWMPIDWTGVGIHDSDWQPEYGGDLWKTRGSHGCINTPPSVMKELFGMVEKGTPVLVF
4XVO Chain:C ((95-222))----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AEVLGVADIDAHTFTVSVDGEVLRKMPASMGKPKFPTPRGTFTALAKEPVVVMDSRTIGIPLSDPEGYKLTVNHAVRVTWGGVYVHSAPWS--VGSQG-YANVSHGCINLSPDNAAWYYDMVSVGDPIIVQ


General information:
TITO was launched using:
RESULT:

Template: 4XVO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain C - contact count / total energy / energy per contact / energy per residue : 582 -3668 -6.30 -29.82
target 2D structure prediction score : 0.68
Monomeric hydrophicity matching model chain C : 0.58

3D Compatibility (PKB) : -6.30
2D Compatibility (Sec. Struct. Predict.) : 0.68
1D Compatibility (Hydrophobicity) : 0.58
QMean score : 0.553

(partial model without unconserved sides chains):
PDB file : Tito_4XVO.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4XVO-query.scw
PDB file : Tito_Scwrl_4XVO.pdb: