Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMPPKRPQALEKLHVAPHDKAVSITDTMTLVVKGEGGVEMRVKQTGIAQGPGSSSASGQPKSDAVMNKIKFEDLRIGSELGKGSQGKVRVAQHKITGEKYAMKYIAFDGDSDDMRSALEAELRQVAAVKHHN---IVSSYEAFFRDGRLYVVLEYMDCGTMNNLIDRHPEGFSEDMLAYIARELFKGLEFLHHLNMIHRDIKPANVLANTKGEIKISDFGVAKTLSGGDLQTLSAQGSVPYMSPERIQSKPYSFNSDIWSAGLTIAECAFREYPFASLKP-KVFELCQAIASGTAKINWDDRETKFSDEFKEFIELCL--RPEATRPSATEMLSHSLIQKASNVNPLEAGRWMSPKK
5DH3 Chain:A ((34-289))-----------------------------------------------------------------------------KLGEGSYGSVFKAIHKESGQVVAIKQVPVESD-------LQEIIKEISIMQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKTLIEDEIATILKSTLKGLEYLHFMRKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITSIEMAEGKPPYADIHPMRAIFMIPTNPPPTFR-----KPELWSDDFTDFVKKCLVKNPE-QRATATQLLQHPFIKNAKPVSIL----------


General information:
TITO was launched using:
RESULT:

Template: 5DH3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1308 -23961 -18.32 -95.84
target 2D structure prediction score : 0.68
Monomeric hydrophicity matching model chain A : 0.73

3D Compatibility (PKB) : -18.32
2D Compatibility (Sec. Struct. Predict.) : 0.68
1D Compatibility (Hydrophobicity) : 0.73
QMean score : 0.553

(partial model without unconserved sides chains):
PDB file : Tito_5DH3.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5DH3-query.scw
PDB file : Tito_Scwrl_5DH3.pdb: