Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceEDGCSASILKYDANGGQETYYGSALPANGSIAFQPTEFSTEVVISVDANC-----NPTNTDDVKKSVPKGWGLHVYKKVTAIAGES
2CIR Chain:A ((121-166))----------------------------------PMDYLLILTVELGSDYLKTAIEVENTSS-SKELKFNWLFHTYFRIED-----


General information:
TITO was launched using:
RESULT:

Template: 2CIR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 76 6823 89.78 166.41
target 2D structure prediction score : 0.49
Monomeric hydrophicity matching model chain A : 0.59

3D Compatibility (PKB) : 89.78
2D Compatibility (Sec. Struct. Predict.) : 0.49
1D Compatibility (Hydrophobicity) : 0.59
QMean score : 0.366

(partial model without unconserved sides chains):
PDB file : Tito_2CIR.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2CIR-query.scw
PDB file : Tito_Scwrl_2CIR.pdb: