Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMDLPNPVLAKVTERVIARSQKTRSAYLQRIEHAQGKFPARGALSCANLAHGFAGMEDNEKLIIKVGREPNIGIVSSYNEMLSAHAPYKTFPDIIKTAARENGGVAQFAGGVPAMCDGITQGNASMELSLFSRETIAMGTAIALSHNMFDAALCLGVCDKIVPGLLIGALQFGYLPTIFVPAGPMSSGLSNDDKA-------KIRQQFATGQVGRDALLEAESAAYHGQGTCTFYGTANSNQMLMEVMGLHLPSAAFVHPHTPLRDALTAEAAKRVLDLTAEQGNYTPIGHVIDEKAIINGIVALLATGGSTNHTLHLIAIAHAAGILIDWDDFDELSAVVPLLAKIYPNGKADVNHFQAAGGVAFLIRNLLEAGLLHNDVKTVAGKGLQHYTKEPKLIDGKLTWVDGVVQSLDDKVLRSIDAPFQPDGGLRLMQGRLGR--GVIKISAVAPEHRKVKAPAIVFDSQEAVQAAF--DRGELHRDFIAVVRFQGARAN-GMPELHRLTPVLGVLQDQGFHVALVTDGRMSG-ASGKVPAVIHLSPEALLNGPIGKVQTGDMLIIDAEAGVLDIEL-DEQTWQSRPVAQPEHQAENEVGFGRELFGVFRAAAAPAEHGASVFGALVGEEPQGQI
5J85 Chain:A ((54-548))--------------------------------------------------------------------PVIGILNTWSDMTPCNGHLRELAEKVKAGVWEAGG---FPLEVPVFS---ASENTFRPTAMMYRNLAALAVEEAIRGQPMDGCVLLVGCD-TTPSLLMGAASCD-LPSIVVTGGPMLNGYFRGERVGSGTHLWKFSEMVKAGEMTQAEFLEAEASMSRSSGTCNTMGTASTMASMAEALGMALSGNAAIPGVDSRRKVMAQLTGRRIVQMVKD--DLKP-SEIMTKQAFENAIRTNAAIGGSTNAVIHLLAIAGRVGIDLSLDDWDRCGRDVPTIVNLMPSGKYLMEEFFYAGGLPVVLKRLGEAGLLHKDALTVSGETVWDEVKD--------------VVNWNEDVILPAEKALTSSGGIVVLRGNLAPKGAVLKPSAASPHLLVHKGRAVVFEDIDDYKAKINDDNLDIDENCIMVMKNCGPKGYPGMAEVGNMGLPPKVLKKGILDMVRISDARMAGTAYGTV--VLHTSPEAAVGGPLAVVKNGDMIELDVPNRRLHLDISDEELARRLAEWQPNH------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 5J85.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 3158 -94471 -29.91 -196.81
target 2D structure prediction score : 0.53
Monomeric hydrophicity matching model chain A : 0.74

3D Compatibility (PKB) : -29.91
2D Compatibility (Sec. Struct. Predict.) : 0.53
1D Compatibility (Hydrophobicity) : 0.74
QMean score : 0.497

(partial model without unconserved sides chains):
PDB file : Tito_5J85.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5J85-query.scw
PDB file : Tito_Scwrl_5J85.pdb: