Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNSTQQWQSVTWFEVDEHQAGQRIDNFLFSRLKGVPKSRIYRLIREGQVRVNKKRIKAETKLAIGDQIRVAPIRYEQKDETAAPVSDSVAQGLLSRVVYEDEGLLVVNKPSGIAVHGGSG-----VAYGLIEALRAATGKKYLELIHRIDRDTSGLVMISKKRSTLKLLQDMLREHKIRKTYAAIVKGQVSLDKQLIDAPLFRYELANGERRVRVSKEGKPSKTEWVVAERFKNATLVHASPLSGRTHQIRVHGLSIGHPLVGDDKY--------GHNTAY--TGPEARRLCLHAMRLDIPGYPTI-------EAPLPEDMTQLLEALRVAK
1V9F Chain:A ((76-312))------------------------------------------------------------------------------FE---------PQDIPLDIVYEDEDIIIINKPRDLVVHPGAGNPDGTVLNALLHYYPPIADVPRAGIVHRLDKDTTGLMVVAKTVPAQTRLVESLQRREITREYEAVAIGHMTAGGT-VDEPISRH--PTKRTHMAVHPMGKPAVTHYRIMEHFRVHTRLRLRLETGRTHQIRVHMAHITHPLVGDPVYGGRPRPPKGASEAFISTLRKFDRQALHATMLRL--YHPISGIEMEWHAPIPQDMVELIEVMR---


General information:
TITO was launched using:
RESULT:

Template: 1V9F.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1126 -11348 -10.08 -52.78
target 2D structure prediction score : 0.53
Monomeric hydrophicity matching model chain A : 0.70

3D Compatibility (PKB) : -10.08
2D Compatibility (Sec. Struct. Predict.) : 0.53
1D Compatibility (Hydrophobicity) : 0.70
QMean score : 0.460

(partial model without unconserved sides chains):
PDB file : Tito_1V9F.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1V9F-query.scw
PDB file : Tito_Scwrl_1V9F.pdb: