Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software) Input alignment information: Query sequence MCCFVVYGGVLNMSDKKTSLVICFTPLQMLIAEKIVAQQPSVDLIVI--ALNNNDKYKYYYNIFQHPNIAKQYYLF----DNNKSRFFKFI-NIIKFNENFKLEKFYENIYISSIDNKYTHNILSKVNFNNLYTYDDGTANIVKNSIYFKQTFE---SKLKDIVLKLIGIRFNLNKIKKLSRKHYTIYKGIQNIVE----QTEYVSIIEKKEEDRNIFIDQEIKIFLGQPLKDIDKNFDTLALKKLLVMEEVNYHFKHPRET-DEAFFEEIKTSYIFEDFFAKELSK--YRKVIIYTLSSTAALNIISLDNVEIRLIKNNTVEIKY--PDLVQLFIKSGATVIDMDSIK 2YK4 Chain:A ((5-321)) -------------------LIFCYTILQMKVAERIMAQHPGERFYVVLMSENRNEKYDYYFN--QIKDKAEWAYFFHLPYGLNKS--FNFIPTMAELKVKAMLLPKVKRIYLASLEKVSIAAFLSTYPDAEIKTFDDGTINLIQSSSYLGDEFSVNGTIKRNFARMMIG-DWSIAKTRNASDEHYTIFKGLKNIMDDGRRKMTYLPLFDASELKAGDETGGTVRILLGSPDKEM-KEISEKAAKNF----NIQYVAPHPRQTYGLSGVTTLNSPYVIEDYILREIKKNPHTRYEIYTFFSGAALTMKDFPNVHVYALKPASLPEDYWLKPVYALFTQSGIPILTFD---

General information: TITO was launched using: RESULT: Template: 2YK4.pdb Alignment : align.pir Tito was launched with SMD and SCWRL Tito text output Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1147 14723 12.84 49.41 target 2D structure prediction score : 0.49 Monomeric hydrophicity matching model chain A : 0.74 3D Compatibility (PKB) : 12.84 2D Compatibility (Sec. Struct. Predict.) : 0.49 1D Compatibility (Hydrophobicity) : 0.74 QMean score : 0.323

(partial model without unconserved sides chains): PDB file : Tito_2YK4.pdb: (Unconserved sides chains are recalculated) : Sequence: align-2YK4-query.scw PDB file : Tito_Scwrl_2YK4.pdb: