Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMAELLTLARPYAKAAFAYASEQGATDNWSNALQVLSAAVQDEAFSAYLNR---PEHTPAEQVKLFAKVLGEDQSQAVSNFLTLLADNDRLVLLPEIAAEYEQLKSQNNNNVDVVIESAFPLTAEQEQLLKSALEKRFNSTVTVSVEVKPELIAGVVIRAGDQVIDDSALNKLEKMRTRLLA
5T4Q Chain:L ((3-162))--EFITVARPYAKAAFDFAVEHQSVERWQDMLAFAAEVTKNEQMAELLSGALAPE-TLAES---FIAVAGEQLDENGQNLIRVMAENGRLNALPDVLEQFIHLRAVSEATAEVDVISAAALSEQQLAKISAAMEKRLSRKVKLNAKIDKSVMAGVIIRAGDMVIDG---------------


General information:
TITO was launched using:
RESULT:

Template: 5T4Q.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain L - contact count / total energy / energy per contact / energy per residue : 516 -24436 -47.36 -155.64
target 2D structure prediction score : 0.61
Monomeric hydrophicity matching model chain L : 0.75

3D Compatibility (PKB) : -47.36
2D Compatibility (Sec. Struct. Predict.) : 0.61
1D Compatibility (Hydrophobicity) : 0.75
QMean score : 0.335

(partial model without unconserved sides chains):
PDB file : Tito_5T4Q.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5T4Q-query.scw
PDB file : Tito_Scwrl_5T4Q.pdb: