Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMATMQCDVVSVKESLYSGAVTMLIAKGAGGELGILPGHAPLVTLLQLGPIRVLLENGTEEIVYVSGGVLEVQPHVVTVLADTAIRADNLDEAAILEARKNAEQLLANQKSDLDSAAALAALAETAAQLETIRKIKNRAQ
5T4O Chain:H ((4-137))--TYHLDVVSAEQQMFSGLVEKIQVTGSEGELGIYPGHAPLLTAIKPGMIRIVKQHGHEEFIYLSGGILEVQPGNVTVLADTAIRGQDLDEARAMEAKRKAEEHISSSHGDVDYAQASAELAKAIAQLRVIELTKK---


General information:
TITO was launched using:
RESULT:

Template: 5T4O.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain H - contact count / total energy / energy per contact / energy per residue : 405 -66793 -164.92 -498.46
target 2D structure prediction score : 0.51
Monomeric hydrophicity matching model chain H : 0.86

3D Compatibility (PKB) : -164.92
2D Compatibility (Sec. Struct. Predict.) : 0.51
1D Compatibility (Hydrophobicity) : 0.86
QMean score : 0.384

(partial model without unconserved sides chains):
PDB file : Tito_5T4O.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5T4O-query.scw
PDB file : Tito_Scwrl_5T4O.pdb: