Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTTRIYVRASTKDQDAERALADLKNFALSIKGDFNEYIENESGTKLD-RPVLNQLLDDSSNGDTLLVESVDRLSRLSQNDFEVLKGRIKDKGLKLVVADLPTTHMLVNSADNITSSILSLVNNMLIDLLATMARLDNDKRRERIKQGLERSGYKPTGKKADTAKHTRIKELNNKGLTKEEIAKAVGCGVATVYRVIKK
5C35 Chain:A ((5-94))-----YARVSSLDQNLERQLENLKTF-----GAEKIFTEKQSGKSIENRPILQKALNFVEMGDRFIVESIDRLGR-NYNEVIHIVNYLKDKEVQLMITSLP-------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 5C35.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 354 7831 22.12 87.99
target 2D structure prediction score : 0.66
Monomeric hydrophicity matching model chain A : 0.65

3D Compatibility (PKB) : 22.12
2D Compatibility (Sec. Struct. Predict.) : 0.66
1D Compatibility (Hydrophobicity) : 0.65
QMean score : 0.480

(partial model without unconserved sides chains):
PDB file : Tito_5C35.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5C35-query.scw
PDB file : Tito_Scwrl_5C35.pdb: