Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNISYELEKKIVNLNALYNEEEAELSLRLSQNIRKNQQDGYVYSLISRGFEIKGLKLWLVDKNIDQLKQWFYVSSVLRAESCKYSSGYTLSTPDEFIFPLLSDNTEIINKFAYLDTVNLLWGEFEPSYQEAKFKP-SKDDPRFRTHALQAVLRNDWEDYKKIKEVANQKINKLREVVQFEFGIYDAIYEKDKDKIIEIVQTLLNPRVHKTYNKDFGEEFNGEIWSHHPVMFTKLAWMNGLEIEIDNPLVPMELMPIKPLEHYDYHYDFLDPNWKPKSLFEKLFGKKRNK
5FXF Chain:A ((362-486))---------------------------------------------------------------------------------------------------VLQDRHKINNGIPSLDELQLL--DWVPNGGHIGFSPVSAPDGREAMKQFEMV-RNRANEYNK--DYAAQFIIGLREMHHVCLFIYDTAIPEAREEILQMTKVLVREAAEAGY---------GEYRTHNALMDDVMATFN---------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 5FXF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 464 -7407 -15.96 -59.73
target 2D structure prediction score : 0.47
Monomeric hydrophicity matching model chain A : 0.63

3D Compatibility (PKB) : -15.96
2D Compatibility (Sec. Struct. Predict.) : 0.47
1D Compatibility (Hydrophobicity) : 0.63
QMean score : 0.305

(partial model without unconserved sides chains):
PDB file : Tito_5FXF.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5FXF-query.scw
PDB file : Tito_Scwrl_5FXF.pdb: