Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMGHSVALNFADGKTFFISVNKDELLLDAAVRQGINLPLDCREGVCGTCQGQCETGIYEQEYVDEDALSERDLAERKMLACQTRVKSDAAFYFDHDSAICNAGDTLKIETQVTAVELVSETTAILHLDASNHAEQLQFLPGQYARLQIPDTEDWRSYSFANRPNATNQLQFLIRLLPDGVMSNYLRDRCQVGQSLLIEAPLGSFYLREV-ERPLVFVAGGTGLSAFLGMLDNLVEQPNSPTVQFYYGVNSETDLCEQQRLHAYAEQLPNFSYHPIVTKATETWQGKAGYIHEHLNKDQLAEQAFDMYLCGPPPMIEAVKNWLDEQALQNYRIYSEKFLQSNTSR
4WQM Chain:A ((16-309))-------------------DSNDTLLSAALRAELVFPYECNSGGCGACKIELLEGEVSNLWPDAPGLAARELRKNRFLACQCKPLSDLKIKVINRAEGRASHPPKRFSTRVVSKRFLSDEMFELRLEAE---QKVVFSPGQYFMVDVPEL-GTRAYSAAN-PVDGNTLTLIVKAVPNGKVSCALAN--ETIETLQLDGPYGLSVLKTADETQSVFIAGGSGIAPMVSMVNTLIAQGYEKPITVFYGSRLEAELEAAETLFGWKENLKLINVSSSVVGNSES-SYPTGYVHEIIPEYMEGLLGAEFYLCGPPQMINSVQKLL----------------------


General information:
TITO was launched using:
RESULT:

Template: 4WQM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1624 -117345 -72.26 -400.49
target 2D structure prediction score : 0.57
Monomeric hydrophicity matching model chain A : 0.75

3D Compatibility (PKB) : -72.26
2D Compatibility (Sec. Struct. Predict.) : 0.57
1D Compatibility (Hydrophobicity) : 0.75
QMean score : 0.365

(partial model without unconserved sides chains):
PDB file : Tito_4WQM.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4WQM-query.scw
PDB file : Tito_Scwrl_4WQM.pdb: