Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMKTQRCGWCSDDPLYIAYHDEEWGKPEHDEARLFEMLCLEGQQAGLSWITVLKKRESYRQHFFNHPIADIAAFTDDFLETKLSDAGLIRHLGKLKAIRDNAIAWQALKAQVDDVSKWLWQFVDAAPQNNDVVDYRKAPAQTELSLKLSKTLKKNGFKFVGPTTCYAFMQAVGMVNDHENNCQFKAS
1NKU Chain:A ((2-179))---ERCGWVSQDPLYIAYHDNEWGVPETDSKKLFEMICLEGQQAGLSWITVLKKRENYRACFHQFDPVKVAAMQEEDVERLVQDAGIIRHRGKIQAIIGNARAYLQMEQNGEPFADFVWSFVNHQPQMTQATTLSEIPTSTPASDALSKALKKRGFKFVGTTICYSFMQACGLVNDHVVGC-----


General information:
TITO was launched using:
RESULT:

Template: 1NKU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 716 -83856 -117.12 -471.10
target 2D structure prediction score : 0.68
Monomeric hydrophicity matching model chain A : 0.82

3D Compatibility (PKB) : -117.12
2D Compatibility (Sec. Struct. Predict.) : 0.68
1D Compatibility (Hydrophobicity) : 0.82
QMean score : 0.476

(partial model without unconserved sides chains):
PDB file : Tito_1NKU.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1NKU-query.scw
PDB file : Tito_Scwrl_1NKU.pdb: