Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMRHLHHQTSQTKLWAVIPAAGSGSRFSKTELKQYQYIQDATVIEHTVKRLSQLP-LTGYVLAIGKQDTFASTLSFQDKHKAHFCNGGVERVHSVLNALNYLSQIADEDDWVLVHDAARPCVTFECLNTLVKNAIETNQSAILAIPVRDTLKQVNQ-EQQIEKTVSRELLWQAQTPQIAKIGILKKAIETALKNNLTITDEASALESIGESVQVVMGRSDNIKITYPDDLELARLILQSQN
1H3M Chain:A ((5-226))----------LDVCAVVPAA---------CPKQYLSIGNQTILEHSVHALLAHPRVKRVVIAISPGDSRFAQLPLANHPQITVVDGGDERADSVLTGL----KAAGDAQWVLVHDAARPCLHQDDLARLLALSETSRTGGILAAPVRDTMKRAEPGKNAIAHTVDRNGLWHALTPQFFPRELLHDCLTRALNEGATITDEASALEYCGFHPQLVEGRADNIKVTRPEDLALAEFYL----


General information:
TITO was launched using:
RESULT:

Template: 1H3M.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1122 -58362 -52.02 -276.59
target 2D structure prediction score : 0.61
Monomeric hydrophicity matching model chain A : 0.80

3D Compatibility (PKB) : -52.02
2D Compatibility (Sec. Struct. Predict.) : 0.61
1D Compatibility (Hydrophobicity) : 0.80
QMean score : 0.435

(partial model without unconserved sides chains):
PDB file : Tito_1H3M.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1H3M-query.scw
PDB file : Tito_Scwrl_1H3M.pdb: