Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMPLIIGIDPGSRLTGYGIIEKDGS--KLRFVDAGTIRTETQE-MPERLKRIFAGVERIVKFHGPTEAAVEQVFMAQNPDSALKLGQARGAAIAALVNLDLQVAEYTARQIKQSVVGYGAADKEQVQMMVMRLLNLTIKPQ-ADAADALAAAICHAHASGSMSKLTVLNALGGMARGRSRSSSRRR
4LD0 Chain:A ((5-158))--VVAGIDPGITHLGLGVVAVEG-ALKARLLHGEVVKTSPQEPAKERVGRIHARVLEVLHRFRPEAVAVQEQFFYRQNELAYKVGWALGAVLVAAFEAGVPVYAYGPMQVKQALA------KEEVALMVRGILGLKEAPRPSHLADALAIALTHA------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4LD0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 657 -44130 -67.17 -310.77
target 2D structure prediction score : 0.57
Monomeric hydrophicity matching model chain A : 0.72

3D Compatibility (PKB) : -67.17
2D Compatibility (Sec. Struct. Predict.) : 0.57
1D Compatibility (Hydrophobicity) : 0.72
QMean score : 0.582

(partial model without unconserved sides chains):
PDB file : Tito_4LD0.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4LD0-query.scw
PDB file : Tito_Scwrl_4LD0.pdb: