Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMQRYPMTPEGKIALEKELQHLKTVERPRITQAIAE---AREHGDLKENAEYHAAREQQGFCEGRIQDIEGKLGTAQVIAVKDLEQNGRVV-FGVTVTIENLDTEERNTYKIVGDDEADF--KINKISVNSPIALGLLGKKEGDEVKITTPQGEVEYEVVSVEYL
4WQT Chain:X ((9-154))----------KAGYERLMQQLER-ERERLQEISADFEQALEEGDLRENAGYDEARRAMWQNEARIDSLEDILSRAVILE----EGSGEVIGLGSVVELEDPLSGERLSVQVVSPAEANVLDTPMKISDASPMGKALLGHRVGDVLSLDTPKGRREFRVVAI---


General information:
TITO was launched using:
RESULT:

Template: 4WQT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain X - contact count / total energy / energy per contact / energy per residue : 386 21285 55.14 152.03
target 2D structure prediction score : 0.61
Monomeric hydrophicity matching model chain X : 0.75

3D Compatibility (PKB) : 55.14
2D Compatibility (Sec. Struct. Predict.) : 0.61
1D Compatibility (Hydrophobicity) : 0.75
QMean score : 0.431

(partial model without unconserved sides chains):
PDB file : Tito_4WQT.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4WQT-query.scw
PDB file : Tito_Scwrl_4WQT.pdb: