Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTAIANNHVVSFHYKLTNAEGETLDQSQGEPLAYLHGAGNIIPGLENALTGKTVGDKFTVNVPAAEGYGEYNPDLVQEVPAQMFQGVDNIQPGMQFQAQTDDGVQI-VTVKAVEGDNVIVDANFPLAGQDLTFEVEIVEIREASQEELDHGHVHGAGGHHH
4ODM Chain:A ((3-149))---VGQDKVVTIRYTL-QVEGEVLDQGE---LSYLHGHRNLIPGLEEALEGREEGEAFQAHVPAEKAYGPHDPEGVQVVPLSAFPEDAEVVPGAQFYAQDMEGNPMPLTVVAVEGEEVTVDFNHPLAGKDLDFQVEVVKVREATPEELLHGHAH-------


General information:
TITO was launched using:
RESULT:

Template: 4ODM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 605 -35575 -58.80 -243.66
target 2D structure prediction score : 0.63
Monomeric hydrophicity matching model chain A : 0.81

3D Compatibility (PKB) : -58.80
2D Compatibility (Sec. Struct. Predict.) : 0.63
1D Compatibility (Hydrophobicity) : 0.81
QMean score : 0.625

(partial model without unconserved sides chains):
PDB file : Tito_4ODM.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4ODM-query.scw
PDB file : Tito_Scwrl_4ODM.pdb: