Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMAAWTPHVTVATVVEKDGRYLFVEEHSEGFVHTVFNQPAGHVECGETLTEAAIRETLEETGHHIDIDALLGIYTYTPPMFPDRT-YYRFCFLAHVTHVESDPKLDTGIVSAVWMTLDELKESARARSPLVIKAIEDAMKGQHYPLALI--YEHPFSPSLTSHLDA
3SHD Chain:A ((4-149))-----PHVTVACVVHAEGKFLVVEETING--KALWNQPAGHLEADETLVEAAARELWEETGISAQPQHFIRMHQW---IAPDKTPFLRFLFAIELEQICPTQPHDSDIDCCRWVSAEEILQASNLRSPLVAESIRCYQSGQRYPLEMIGDFNWPFT---------


General information:
TITO was launched using:
RESULT:

Template: 3SHD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 706 -61661 -87.34 -431.19
target 2D structure prediction score : 0.47
Monomeric hydrophicity matching model chain A : 0.78

3D Compatibility (PKB) : -87.34
2D Compatibility (Sec. Struct. Predict.) : 0.47
1D Compatibility (Hydrophobicity) : 0.78
QMean score : 0.486

(partial model without unconserved sides chains):
PDB file : Tito_3SHD.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3SHD-query.scw
PDB file : Tito_Scwrl_3SHD.pdb: