Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKERFQMKKYQWGIVGLGTIAHEFA---ESFNQETSELTAVASRTSEKAENFAHRYNIPKAYGSYQEMLDDAEIDIVYIAVPNRQHIDHILAALEAGKHVLCEKAITMNKKELADAMRLAEEKNLILAEAMTIFNMPLYQQLRSIMDTGKLGALKMIQAPFGSYKEPDPKNRFFNPELAGGALLDIGTYAVSFARFFLSSQ-PEVVASTMVPFETGVDEQSVTILRNKENEL-AAVSLTFQAKMPKVGIVAFENGYVTIADYPRADRAEILFTDGTKEFI-------ESGNTSEAMNYEIKNMVHMIEGDL---PNRSLFLTKDVIEILDQMQVLWKNM
2POQ Chain:X ((4-322))----------RWGIVSVGLISSDFTAVLQTLPRSEHQVVAVAARDLSRAKEFAQKHDIPKAYGSYEELAKDPNVEVAYVGTQHPQHKAAVMLCLAAGKAVLCEKPMGVNAAEVREMVTEARSRGLFLMEAIWTRFFPASEALRSVLAQGTLGDLRVARAEFGKNLTHVP--RAVDWAQAGGALLDLGIYCVQFISMVFGGQKPEKISVMGRRHETGVDD-TVTVLLQYPGEVHGSFTCSITAQLSNTASVSGTKGMAQLLN-PCWCPTELVVKGEHKEFLLPPVPKNCNFDNGAGMSYEAKHVRECLRKGLKESPVIPLVESELLADILEEVR------


General information:
TITO was launched using:
RESULT:

Template: 2POQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain X - contact count / total energy / energy per contact / energy per residue : 1713 -7569 -4.42 -24.90
target 2D structure prediction score : 0.66
Monomeric hydrophicity matching model chain X : 0.78

3D Compatibility (PKB) : -4.42
2D Compatibility (Sec. Struct. Predict.) : 0.66
1D Compatibility (Hydrophobicity) : 0.78
QMean score : 0.541

(partial model without unconserved sides chains):
PDB file : Tito_2POQ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2POQ-query.scw
PDB file : Tito_Scwrl_2POQ.pdb: