Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKTAFLFSGQGAQYQGMGKDLYEE-AVVKQTFDEASEILGYDMAELCFTEN-ERLDQTQYTQPAILTVSIAYYRLLKEHGIIPDAAL-GLSLGEYSALVASNALSFTEAVALVAKRGAYMTEAAPAGSGKMVAVMNAPIETIEESCHEASKYGIVSPANYNTPQQIVIGGEEKAVDEAVLLLKEKGFKRMIPLNVSGPFHTAILEPAAKKLAKDLSQIQFSEPSFPIISNTT----TEIMKKETIAGLLEQQVMQPVRFYESIHKLKTIGIEQVIEVGPGKVLSGFMKKIDKTIPVLRVENKQTFDETIAIL
3HJV Chain:A ((8-309))-KFAIVFPGQGSQAVGMLADLAEQYAVVKQTFAEASEVLGYDLWALVQDGPVEDLNQTFRTQPALLAASVAIWRVWQQLGLEQPAVLAGHSLGEYSALVCAGVIDFKQAIKLVELRGQLMQQAVPAGTGAMYAIIGLEDEAIAKACADAAQGEVVSPVNFNSPGQVVIAGQKDAVERAGVLCKEAGAKRALPLPVSVPSHCALMKPAADELAKTLAELEFNAPQIPVINNVDVVAETDPVK---IKDALIRQLYSPVRWTECVEQMSAQGVEKLIE-GPGKVLTGLTKRIVKTLEGVAVNDVASLD------


General information:
TITO was launched using:
RESULT:

Template: 3HJV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1728 -27639 -15.99 -94.01
target 2D structure prediction score : 0.71
Monomeric hydrophicity matching model chain A : 0.82

3D Compatibility (PKB) : -15.99
2D Compatibility (Sec. Struct. Predict.) : 0.71
1D Compatibility (Hydrophobicity) : 0.82
QMean score : 0.631

(partial model without unconserved sides chains):
PDB file : Tito_3HJV.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3HJV-query.scw
PDB file : Tito_Scwrl_3HJV.pdb: