Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGIIEPSLRQLAQKYNCDKMICRKCYARLHPRAVNCRKKKCGHTNNLRPKKKVK
5CVM Chain:B ((21-96))MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG----------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 5CVM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 291 -40131 -137.91 -528.04
target 2D structure prediction score : 0.80
Monomeric hydrophicity matching model chain B : 0.85

3D Compatibility (PKB) : -137.91
2D Compatibility (Sec. Struct. Predict.) : 0.80
1D Compatibility (Hydrophobicity) : 0.85
QMean score : 0.704

(partial model without unconserved sides chains):
PDB file : Tito_5CVM.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5CVM-query.scw
PDB file : Tito_Scwrl_5CVM.pdb: